netmap.downstream.regulon.aggregate_edges_arbitrary¶
- netmap.downstream.regulon.aggregate_edges_arbitrary(grn_adata, edge_dict)[source]¶
Aggregate attribution scores for arbitrary named edge sets.
- Parameters:
grn_adata (anndata.AnnData) – GRN AnnData with attribution values in
X.edge_dict (dict) – Mapping
{regulon_name: [edge_list]}.
- Returns:
Regulon activity matrix, shape
(n_cells, n_regulons).- Return type: