netmap.downstream.clustering.process

netmap.downstream.clustering.process(grn_adata, n_clu=2, key_added='spectral')

Wrapper function for convenience processing and clustering

Parameters:

  • grn_adata (AnnData) – A GRN anndata object to process

  • n_clu (int) – Number of clusters to compute

  • key_added (str) – The key to add the new labelling to [Default: spectral]

Returns:

grn_adata – Processed Anndata object with an additional column in the .obs slot of the object named key_added

Return type:

AnnData